dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003351_370|CGC1
Gene ID: MGYG000003351_03056
Location and strand information: 4650 - 6677 (-)
Family: PL8
Protein type: CAZyme
Protein description: Chondroitinase-AC
Protein isoelectric point: 8.8619
Protein molecular weight: 77617.59
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003351_370|CGC1
Gene ID: MGYG000003351_03057
Location and strand information: 6724 - 7860 (-)
Family: GH117
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.1802
Protein molecular weight: 42831.7
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003351_370|CGC1
Gene ID: MGYG000003351_03058
Location and strand information: 7967 - 11959 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000003351_370|CGC1
Gene ID: MGYG000003351_03059
Location and strand information: 12036 - 13430 (+)
Family: GH88
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.0078
Protein molecular weight: 52838.23
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003351_370|CGC1
Gene ID: MGYG000003351_03060
Location and strand information: 13494 - 16658 (+)
Family: 1.B.14.6.1
Protein type: TC
Protein description: TonB-dependent receptor SusC

Gene clsuter ID: MGYG000003351_370|CGC1
Gene ID: MGYG000003351_03061
Location and strand information: 16682 - 18304 (+)
Family: 8.A.46.1.3
Protein type: TC
Protein description: SusD-like protein

Gene clsuter ID: MGYG000003351_370|CGC1
Gene ID: MGYG000003351_03062
Location and strand information: 18322 - 19251 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003351_370|CGC1
Gene ID: MGYG000003351_03063
Location and strand information: 19257 - 21695 (+)
Family: PL30
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.5995
Protein molecular weight: 91910.41
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003351_370|CGC1
Gene ID: MGYG000003351_03064
Location and strand information: 21718 - 23247 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003351_370|CGC1
Gene ID: MGYG000003351_03065
Location and strand information: 23271 - 24098 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003351_370|CGC1
Gene ID: MGYG000003351_03066
Location and strand information: 24594 - 26849 (-)
Family: GH95
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 7.3966
Protein molecular weight: 86166.94
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is glycosaminoglycan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003351_03056	Chondroitinase-AC	CAZyme	4650	6677	-	PL8
MGYG000003351_03057	hypothetical protein	CAZyme	6724	7860	-	GH117
MGYG000003351_03058	Sensor histidine kinase RcsC	TF	7967	11959	-	HTH_AraC
MGYG000003351_03059	hypothetical protein	CAZyme	12036	13430	+	GH88
MGYG000003351_03060	TonB-dependent receptor SusC	TC	13494	16658	+	1.B.14.6.1
MGYG000003351_03061	SusD-like protein	TC	16682	18304	+	8.A.46.1.3
MGYG000003351_03062	hypothetical protein	null	18322	19251	+	DUF5017
MGYG000003351_03063	hypothetical protein	CAZyme	19257	21695	+	PL30
MGYG000003351_03064	hypothetical protein	null	21718	23247	+	Mfa_like_1\| DUF4627
MGYG000003351_03065	hypothetical protein	null	23271	24098	+	Mfa_like_1
MGYG000003351_03066	hypothetical protein	CAZyme	24594	26849	-	GH95
Protein ID	Protein Name	Type	Start	End	Strand	Signature